Variant report

Variant	rs531166682
Chromosome Location	chr10:89959690-89959691
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831940	chr10:89811247-89989199	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv895878	chr10:89959082-90006507	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89951000-89965600	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr10:89955200-89960000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr10:89955400-89960400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr10:89955400-89962400	Weak transcription	Left Ventricle	heart
5	chr10:89955400-89963800	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr10:89955400-89965000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr10:89955400-89998000	Weak transcription	Aorta	Aorta
8	chr10:89956400-89960000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr10:89956600-89960400	Weak transcription	Fetal Muscle Leg	muscle
10	chr10:89958600-89960200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr10:89959200-89960200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr10:89959200-89961400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr10:89959200-89961600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr10:89959600-89961800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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