Variant report

Variant	rs531178334
Chromosome Location	chr7:144779521-144779522
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031071	chr7:144318082-145125392	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv539169	chr7:144318082-145125392	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv1032851	chr7:144506434-144902687	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv608900	chr7:144770396-144788726	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:144779200-144779600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
2	chr7:144779200-144779600	Enhancers	H9 Cell Line	embryonic stem cell
3	chr7:144779200-144779600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr7:144779200-144779800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr7:144779200-144780000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr7:144779200-144780400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr7:144779200-144780400	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr7:144779200-144780600	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr7:144779200-144780800	Enhancers	HMEC	breast
10	chr7:144779400-144779600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr7:144779400-144780200	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr7:144779400-144780600	Flanking Active TSS	Dnd41	blood
13	chr7:144779400-144780800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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