Variant report

Variant	rs531255567
Chromosome Location	chr21:28058783-28058784
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv544413	chr21:27942060-28065995	Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3385593	chr21:28058415-28058942	Flanking Active TSS Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:28057800-28059000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
2	chr21:28058400-28059000	Enhancers	Primary T killer memory cells from peripheral blood	blood
3	chr21:28058400-28059000	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr21:28058600-28058800	Flanking Active TSS	Primary T cells from cord blood	blood
5	chr21:28058600-28058800	Enhancers	HMEC	breast
6	chr21:28058600-28059000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr21:28058600-28059000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr21:28058600-28059000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr21:28058600-28059000	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr21:28058600-28059000	Flanking Active TSS	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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