Variant report

Variant	rs531348990
Chromosome Location	chr8:68314056-68314057
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752263	chr8:68170946-68788493	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	esv1839724	chr8:68195817-68346693	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1024135	chr8:68235792-68629789	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv539642	chr8:68235792-68629789	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	esv2752264	chr8:68244546-68647201	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv518005	chr8:68312818-68319668	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:68309600-68327200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:68311800-68314200	Enhancers	Thymus	Thymus
3	chr8:68312000-68314200	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr8:68312200-68314400	Enhancers	Primary T cells fromperipheralblood	blood
5	chr8:68312400-68314200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr8:68312600-68314200	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr8:68312600-68314200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr8:68312600-68314200	Enhancers	Fetal Thymus	thymus
9	chr8:68312600-68314400	Enhancers	Primary hematopoietic stem cells	blood
10	chr8:68312600-68314400	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr8:68312600-68314400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:68312800-68314400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:68313400-68314400	Enhancers	Primary T cells from cord blood	blood
14	chr8:68313600-68314400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr8:68313800-68314200	Enhancers	Primary T helper naive cells from peripheral blood	blood
16	chr8:68313800-68314200	Enhancers	Sigmoid Colon	Sigmoid Colon
17	chr8:68314000-68314200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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