Variant report

Variant	rs531456590
Chromosome Location	chr4:7443927-7443928
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916610	chr4:7238883-7731946	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv593569	chr4:7291363-7626136	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1011547	chr4:7318232-7637410	Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
4	nsv537017	chr4:7318232-7637410	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1003679	chr4:7319111-7449262	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv469758	chr4:7370083-7546250	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
7	nsv878560	chr4:7402284-7475114	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
8	nsv878561	chr4:7402284-7544610	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
9	nsv878563	chr4:7420785-7529367	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
10	nsv878564	chr4:7421007-7535214	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
11	nsv878565	chr4:7421498-7455318	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv593573	chr4:7440581-7444178	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv1794034	chr4:7441746-7455090	Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv1811440	chr4:7441746-7455090	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv1831419	chr4:7441746-7455090	Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv1839735	chr4:7441746-7455090	Bivalent Enhancer Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv1847397	chr4:7441746-7455090	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv593574	chr4:7441852-7444178	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	nsv593575	chr4:7442086-7444118	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	nsv593576	chr4:7442126-7443955	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
21	esv3359277	chr4:7442627-7445450	Enhancers Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
22	esv3438413	chr4:7443202-7444850	Enhancers Bivalent Enhancer Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv17713	chr4:7443255-7444420	Weak transcription Enhancers Genic enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
24	nsv593577	chr4:7443285-7443955	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
25	nsv593578	chr4:7443285-7444178	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
26	esv1818289	chr4:7443285-7451187	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	nsv593580	chr4:7443337-7444178	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
28	nsv593583	chr4:7443388-7443955	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	nsv593584	chr4:7443388-7444007	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
30	nsv593585	chr4:7443388-7444064	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
31	nsv593586	chr4:7443388-7444118	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
32	nsv593587	chr4:7443388-7444178	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
33	nsv593588	chr4:7443388-7445048	Weak transcription Enhancers Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv1822281	chr4:7443388-7448581	Enhancers Bivalent Enhancer Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
35	nsv593589	chr4:7443442-7443955	Weak transcription	n/a	n/a	inside rSNPs	diseases
36	nsv593590	chr4:7443442-7444007	Weak transcription	n/a	n/a	inside rSNPs	diseases
37	nsv593591	chr4:7443442-7444064	Weak transcription	n/a	n/a	inside rSNPs	diseases
38	nsv593592	chr4:7443442-7444178	Weak transcription	n/a	n/a	inside rSNPs	diseases
39	nsv593598	chr4:7443493-7443955	Weak transcription	n/a	n/a	inside rSNPs	diseases
40	nsv593599	chr4:7443493-7444007	Weak transcription	n/a	n/a	inside rSNPs	diseases
41	nsv593600	chr4:7443493-7444064	Weak transcription	n/a	n/a	inside rSNPs	diseases
42	nsv593601	chr4:7443493-7444118	Weak transcription	n/a	n/a	inside rSNPs	diseases
43	nsv593602	chr4:7443493-7444178	Weak transcription	n/a	n/a	inside rSNPs	diseases
44	nsv593603	chr4:7443544-7444007	Weak transcription	n/a	n/a	inside rSNPs	diseases
45	nsv593604	chr4:7443544-7444118	Weak transcription	n/a	n/a	inside rSNPs	diseases
46	nsv593607	chr4:7443595-7444007	Weak transcription	n/a	n/a	inside rSNPs	diseases
47	nsv593609	chr4:7443648-7444178	Weak transcription	n/a	n/a	inside rSNPs	diseases
48	nsv593610	chr4:7443699-7444178	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:7437800-7462400	Weak transcription	Right Atrium	heart
2	chr4:7438200-7447000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr4:7443200-7444400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr4:7443400-7444400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr4:7443400-7444400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr4:7443400-7444400	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr4:7443400-7444400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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