Variant report

Variant	rs531565724
Chromosome Location	chr7:116382985-116382986
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116377829..116379958-chr7:116381598..116383954,2	MCF-7	breast:
2	chr7:116382950..116385593-chr7:116392387..116393932,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024485	chr7:116375336-116391582	Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1018515	chr7:116380755-116391582	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv274927	chr7:116382918-116395518	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116351800-116407000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr7:116357400-116409800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr7:116375000-116418400	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr7:116375800-116411200	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr7:116377800-116395600	Weak transcription	NH-A	brain
6	chr7:116378000-116389000	Weak transcription	Stomach Mucosa	stomach
7	chr7:116378800-116422200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr7:116379000-116384600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:116379000-116385200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr7:116379200-116384400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr7:116380000-116383200	Genic enhancers	HepG2	liver
12	chr7:116380400-116383800	Weak transcription	Spleen	Spleen
13	chr7:116380800-116383200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr7:116381200-116384000	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr7:116381200-116392200	Weak transcription	HUVEC	blood vessel
16	chr7:116381400-116383000	Genic enhancers	Muscle Satellite Cultured Cells	--
17	chr7:116381400-116383200	Genic enhancers	Fetal Intestine Small	intestine
18	chr7:116381400-116413400	Weak transcription	NHLF	lung
19	chr7:116381600-116383200	Enhancers	Fetal Intestine Large	intestine
20	chr7:116381600-116383200	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr7:116381600-116383800	Enhancers	Fetal Kidney	kidney
22	chr7:116381600-116384200	Weak transcription	Gastric	stomach
23	chr7:116381600-116398600	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr7:116381600-116418600	Weak transcription	Aorta	Aorta
25	chr7:116381800-116383000	Weak transcription	Fetal Stomach	stomach
26	chr7:116381800-116384000	Enhancers	Fetal Muscle Leg	muscle
27	chr7:116381800-116385600	Weak transcription	Lung	lung
28	chr7:116381800-116407000	Weak transcription	Pancreas	Pancrea
29	chr7:116382000-116398000	Weak transcription	Hela-S3	cervix
30	chr7:116382000-116413400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr7:116382200-116384200	Strong transcription	Osteobl	bone
32	chr7:116382200-116384400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr7:116382200-116384400	Strong transcription	A549	lung
34	chr7:116382200-116409800	Weak transcription	Placenta	Placenta
35	chr7:116382400-116383600	Strong transcription	HSMM	muscle
36	chr7:116382400-116384000	Strong transcription	NHEK	skin
37	chr7:116382400-116384200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr7:116382400-116384200	Weak transcription	Fetal Lung	lung
39	chr7:116382400-116384600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr7:116382400-116384800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr7:116382400-116396400	Weak transcription	HMEC	breast
42	chr7:116382600-116384200	Strong transcription	Rectal Mucosa Donor 31	rectum
43	chr7:116382800-116383000	ZNF genes & repeats	Left Ventricle	heart
44	chr7:116382800-116383000	Strong transcription	Psoas Muscle	Psoas
45	chr7:116382800-116383200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr7:116382800-116383200	Flanking Active TSS	Liver	Liver
47	chr7:116382800-116383800	Genic enhancers	Fetal Muscle Trunk	muscle
48	chr7:116382800-116384000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr7:116382800-116384000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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