Variant report

Variant	rs531760973
Chromosome Location	chr3:69822593-69822594
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:69747459..69749389-chr3:69820708..69823563,2	K562	blood:
2	chr3:69820056..69823613-chr3:69833464..69836716,3	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3507784	chr3:69802539-69959607	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3507785	chr3:69802539-69959607	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1009045	chr3:69821621-69875782	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69814000-69823800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr3:69814400-69823400	Weak transcription	Brain Angular Gyrus	brain
3	chr3:69814400-69823800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr3:69814400-69834000	Weak transcription	Right Ventricle	heart
5	chr3:69814600-69824400	Enhancers	Colon Smooth Muscle	Colon
6	chr3:69816000-69823200	Weak transcription	Right Atrium	heart
7	chr3:69816000-69823400	Weak transcription	Aorta	Aorta
8	chr3:69817600-69823200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr3:69818000-69823800	Weak transcription	Brain Cingulate Gyrus	brain
10	chr3:69818200-69823000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr3:69819000-69823000	Enhancers	Fetal Heart	heart
12	chr3:69819400-69824600	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr3:69819400-69827200	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr3:69819600-69825800	Enhancers	Rectal Smooth Muscle	rectum
15	chr3:69820000-69824600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr3:69820400-69822600	Enhancers	Psoas Muscle	Psoas
17	chr3:69820600-69823200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr3:69820800-69823800	Enhancers	Fetal Muscle Leg	muscle
19	chr3:69820800-69825800	Weak transcription	Osteobl	bone
20	chr3:69820800-69826000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr3:69821000-69823000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr3:69821000-69823000	Weak transcription	HMEC	breast
23	chr3:69821000-69825800	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr3:69821200-69823000	Weak transcription	NHEK	skin
25	chr3:69821200-69823200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr3:69821200-69823200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr3:69821200-69825600	Weak transcription	HUVEC	blood vessel
28	chr3:69821200-69834000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr3:69821400-69822800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr3:69821400-69823400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr3:69821800-69822600	Enhancers	Adipose Nuclei	Adipose
32	chr3:69821800-69822600	Enhancers	Left Ventricle	heart
33	chr3:69821800-69824400	Enhancers	Ovary	ovary
34	chr3:69821800-69826400	Enhancers	K562	blood
35	chr3:69821800-69826800	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr3:69822000-69825600	Weak transcription	NHDF-Ad	bronchial
37	chr3:69822200-69823400	Weak transcription	Brain Hippocampus Middle	brain
38	chr3:69822400-69822800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr3:69822400-69823200	Weak transcription	Lung	lung
40	chr3:69822400-69825400	Weak transcription	NHLF	lung
41	chr3:69822400-69830800	Weak transcription	Stomach Smooth Muscle	stomach
42	chr3:69822400-69834400	Weak transcription	Gastric	stomach

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