Variant report

Variant rs531787297
Chromosome Location chr21:47603582-47603583
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47573800-47603800 Weak transcription Right Atrium heart
2 chr21:47582400-47603800 Weak transcription Thymus Thymus
3 chr21:47594200-47603800 Weak transcription Fetal Intestine Small intestine
4 chr21:47597200-47603800 Weak transcription Fetal Brain Female brain
5 chr21:47598600-47603800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr21:47600200-47603600 Enhancers H1 Cell Line embryonic stem cell
7 chr21:47600800-47603800 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr21:47601000-47603800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr21:47601200-47603800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr21:47601200-47603800 Weak transcription Colon Smooth Muscle Colon
11 chr21:47601200-47604000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr21:47602000-47603800 Enhancers Gastric stomach
13 chr21:47602000-47604000 Enhancers Spleen Spleen
14 chr21:47602200-47603600 Enhancers Brain Anterior Caudate brain
15 chr21:47602200-47603800 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr21:47602400-47603800 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr21:47602400-47604000 Enhancers Fetal Brain Male brain
18 chr21:47602600-47603800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr21:47602600-47603800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr21:47602600-47603800 Enhancers Fetal Muscle Trunk muscle
21 chr21:47602800-47603600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
22 chr21:47602800-47603600 Enhancers Brain Inferior Temporal Lobe brain
23 chr21:47602800-47603600 Enhancers Ovary ovary
24 chr21:47602800-47603800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr21:47602800-47603800 Enhancers Esophagus oesophagus
26 chr21:47602800-47603800 Enhancers Lung lung
27 chr21:47602800-47603800 Enhancers Pancreas Pancrea
28 chr21:47602800-47603800 Enhancers Right Ventricle heart
29 chr21:47602800-47603800 Enhancers Skeletal Muscle Male skeletal muscle
30 chr21:47602800-47603800 Enhancers Skeletal Muscle Female skeletal muscle
31 chr21:47602800-47605600 Active TSS Brain Angular Gyrus brain
32 chr21:47603000-47603600 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
33 chr21:47603000-47603800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr21:47603000-47603800 Enhancers Primary B cells from peripheral blood blood
35 chr21:47603000-47603800 Bivalent Enhancer Primary T cells fromperipheralblood blood
36 chr21:47603000-47603800 Enhancers Primary T helper cells fromperipheralblood blood
37 chr21:47603000-47603800 Enhancers Brain Hippocampus Middle brain
38 chr21:47603000-47603800 Enhancers Brain Substantia Nigra brain
39 chr21:47603000-47603800 Enhancers Duodenum Mucosa Duodenum
40 chr21:47603000-47603800 Enhancers Fetal Muscle Leg muscle
41 chr21:47603000-47605200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr21:47603000-47605200 Active TSS iPS-20b Cell Line embryonic stem cell
43 chr21:47603000-47605400 Active TSS iPS-18 Cell Line embryonic stem cell
44 chr21:47603200-47603600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr21:47603200-47603600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr21:47603200-47603800 Enhancers Primary monocytes fromperipheralblood blood
47 chr21:47603200-47603800 Active TSS Primary hematopoietic stem cells blood
48 chr21:47603200-47603800 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr21:47603200-47603800 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr21:47603200-47603800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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