Variant report

Variant	rs531859471
Chromosome Location	chr5:93051018-93051019
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532196	chr5:92933949-93573527	Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv823133	chr5:93049250-93051884	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:93038400-93076200	Weak transcription	Ovary	ovary
2	chr5:93040600-93088600	Weak transcription	Aorta	Aorta
3	chr5:93041000-93051400	Weak transcription	Fetal Heart	heart
4	chr5:93043000-93076400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr5:93045000-93073200	Weak transcription	Primary B cells from cord blood	blood
6	chr5:93049200-93052800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr5:93050200-93053000	Weak transcription	HUVEC	blood vessel
8	chr5:93050400-93052400	Enhancers	Fetal Intestine Small	intestine
9	chr5:93051000-93051200	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr5:93051000-93051800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr5:93051000-93052000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:93051000-93052800	Enhancers	HepG2	liver
13	chr5:93051000-93053200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr5:93051000-93053400	Enhancers	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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