Variant report

Variant rs531876564
Chromosome Location chr22:22301409-22301410
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22293000-22306200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:22293000-22306400 Weak transcription Small Intestine intestine
3 chr22:22293200-22301600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr22:22293200-22301600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
5 chr22:22293200-22301800 Genic enhancers Spleen Spleen
6 chr22:22293200-22305400 Genic enhancers Fetal Muscle Trunk muscle
7 chr22:22293200-22306000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr22:22293400-22302600 Genic enhancers Fetal Muscle Leg muscle
9 chr22:22293600-22301600 Strong transcription Fetal Intestine Small intestine
10 chr22:22297200-22302400 Genic enhancers Primary hematopoietic stem cells short term culture blood
11 chr22:22297200-22306000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr22:22297200-22306000 Weak transcription GM12878-XiMat blood
13 chr22:22297800-22304400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr22:22299600-22303800 Weak transcription Primary B cells from cord blood blood
15 chr22:22299600-22306000 Weak transcription Hela-S3 cervix
16 chr22:22299800-22301800 Enhancers Psoas Muscle Psoas
17 chr22:22299800-22306000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr22:22300000-22301600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr22:22300000-22301800 Weak transcription Fetal Kidney kidney
20 chr22:22300000-22302400 Weak transcription Fetal Brain Male brain
21 chr22:22300000-22305200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr22:22300200-22301800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr22:22300200-22301800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr22:22300200-22301800 Weak transcription Brain Hippocampus Middle brain
25 chr22:22300200-22302000 Weak transcription Brain Substantia Nigra brain
26 chr22:22300200-22304400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr22:22300200-22304800 Enhancers Skeletal Muscle Female skeletal muscle
28 chr22:22300200-22305600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr22:22300200-22306000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr22:22300200-22306000 Weak transcription Brain Cingulate Gyrus brain
31 chr22:22300200-22306000 Weak transcription HepG2 liver
32 chr22:22300200-22306200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr22:22300200-22306400 Weak transcription H9 Cell Line embryonic stem cell
34 chr22:22300400-22302000 Enhancers Right Ventricle heart
35 chr22:22300400-22302800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr22:22300400-22303600 Enhancers Adipose Nuclei Adipose
37 chr22:22300400-22304400 Genic enhancers Fetal Stomach stomach
38 chr22:22300400-22304600 Weak transcription Primary B cells from peripheral blood blood
39 chr22:22300400-22305400 Weak transcription Liver Liver
40 chr22:22300400-22306000 Weak transcription Colonic Mucosa Colon
41 chr22:22300400-22306000 Weak transcription Duodenum Mucosa Duodenum
42 chr22:22300400-22306200 Weak transcription Aorta Aorta
43 chr22:22300400-22306400 Weak transcription Thymus Thymus
44 chr22:22300600-22301600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr22:22300600-22301600 Genic enhancers HSMM muscle
46 chr22:22300600-22302000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr22:22300600-22302800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr22:22300600-22303200 Weak transcription Brain Angular Gyrus brain
49 chr22:22300600-22303200 Weak transcription Fetal Thymus thymus
50 chr22:22300600-22304000 Enhancers Left Ventricle heart

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