| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv817248 |
chr9:706283-1457665 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1016222 |
chr9:999390-1284180 |
Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1016321 |
chr9:1034594-1592366 |
Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv539908 |
chr9:1034594-1592366 |
Bivalent Enhancer Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv948914 |
chr9:1050981-1311310 |
Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2758176 |
chr9:1055347-1529128 |
Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv2759656 |
chr9:1055347-1529128 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv2752273 |
chr9:1062218-1824888 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1026043 |
chr9:1079462-1732502 |
Active TSS Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv539909 |
chr9:1079462-1732502 |
Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv2757301 |
chr9:1183321-1413700 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
esv34351 |
chr9:1184213-1413700 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
esv2756319 |
chr9:1185520-1293110 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv892020 |
chr9:1189365-1265994 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
nsv818672 |
chr9:1200036-1404430 |
Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 16 |
nsv1031506 |
chr9:1216007-1472056 |
Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 17 |
nsv613050 |
chr9:1230619-1311310 |
Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 18 |
nsv1022624 |
chr9:1231372-1311310 |
Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 19 |
nsv1024226 |
chr9:1240191-1309969 |
Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 20 |
esv2762781 |
chr9:1243452-1283014 |
Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
nsv8406 |
chr9:1248354-1262348 |
Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 22 |
nsv972601 |
chr9:1255865-1258853 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page:
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