Variant report

Variant	rs531922495
Chromosome Location	chr3:82605365-82605366
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013820	chr3:82175705-82968181	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv965384	chr3:82603863-82608331	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82603800-82607200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr3:82604000-82606600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr3:82604200-82605400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr3:82604200-82607200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr3:82604200-82607200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr3:82604400-82605400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:82604400-82606600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr3:82605000-82607800	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr3:82605200-82605800	Enhancers	Cortex derived primary cultured neurospheres	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links