Variant report

Variant	rs531995194
Chromosome Location	chr12:83604215-83604216
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521849	chr12:83013783-83991479	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv559559	chr12:83505512-83765069	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv899352	chr12:83556258-83671428	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
4	nsv559560	chr12:83599202-83608767	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv1046478	chr12:83603552-83669089	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:83603800-83605400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr12:83604200-83604400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr12:83604200-83604400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:83604200-83604600	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr12:83604200-83604800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr12:83604200-83605400	Enhancers	H1 Cell Line	embryonic stem cell
7	chr12:83604200-83605600	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr12:83604200-83605800	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr12:83604200-83606000	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr12:83604200-83606400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr12:83604200-83606400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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