No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv1064371 |
chr19:56418215-56842450 |
ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
65 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1057316 |
chr19:56418215-56849458 |
Strong transcription Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
65 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv912516 |
chr19:56601298-56981382 |
Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
93 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv828647 |
chr19:56701488-56758401 |
Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv1058152 |
chr19:56703368-56805035 |
Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv544093 |
chr19:56703368-56805035 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
7 |
esv3528005 |
chr19:56712029-56750105 |
Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
8 |
esv3528006 |
chr19:56712029-56750105 |
Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
9 |
esv7336 |
chr19:56712118-56750459 |
Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
inside rSNPs
|
diseases
|
10 |
esv3365117 |
chr19:56718267-56756501 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv580355 |
chr19:56723492-56752892 |
Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv580356 |
chr19:56723492-56762780 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv526325 |
chr19:56741186-56852035 |
Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
14 |
nsv521243 |
chr19:56742675-56752892 |
Active TSS Weak transcription ZNF genes & repeats Enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv1064389 |
chr19:56744629-56768232 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv821531 |
chr19:56745181-56748414 |
Weak transcription ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
17 |
esv16056 |
chr19:56745440-56748414 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
18 |
esv14578 |
chr19:56745506-56750701 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|