Variant report

Variant	rs532064485
Chromosome Location	chr2:56671633-56671634
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834093	chr2:56538097-56708677	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1004449	chr2:56538460-56715861	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv874171	chr2:56545845-56727178	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv522944	chr2:56603985-56676997	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv874172	chr2:56638856-56811749	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	esv2757800	chr2:56659685-56851198	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	esv2759052	chr2:56659685-56851198	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:56670800-56673200	Enhancers	Fetal Intestine Large	intestine
2	chr2:56671400-56672000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr2:56671400-56672000	Enhancers	Fetal Heart	heart
4	chr2:56671400-56672200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr2:56671600-56671800	Enhancers	Duodenum Mucosa	Duodenum
6	chr2:56671600-56672000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr2:56671600-56672000	Enhancers	Muscle Satellite Cultured Cells	--
8	chr2:56671600-56672000	Enhancers	Fetal Muscle Leg	muscle
9	chr2:56671600-56672000	Enhancers	Left Ventricle	heart
10	chr2:56671600-56672000	Enhancers	Right Atrium	heart
11	chr2:56671600-56672000	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr2:56671600-56672000	Enhancers	HSMM	muscle
13	chr2:56671600-56672200	Enhancers	Gastric	stomach
14	chr2:56671600-56672200	Enhancers	Psoas Muscle	Psoas
15	chr2:56671600-56672200	Enhancers	Stomach Mucosa	stomach
16	chr2:56671600-56673000	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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