Variant report

Variant rs532139709
Chromosome Location chr6:32155916-32155917
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:32147600-32156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:32147600-32156200 Genic enhancers Primary T cells fromperipheralblood blood
5 chr6:32149800-32156600 Weak transcription Stomach Mucosa stomach
6 chr6:32150200-32156200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr6:32151000-32156400 Weak transcription Ovary ovary
8 chr6:32152400-32156200 Weak transcription Hela-S3 cervix
9 chr6:32152400-32160600 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr6:32153400-32156000 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr6:32153600-32156000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
12 chr6:32153600-32156000 Genic enhancers Fetal Stomach stomach
13 chr6:32153600-32156000 Weak transcription NH-A brain
14 chr6:32153600-32156200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:32153600-32156200 Genic enhancers Primary monocytes fromperipheralblood blood
16 chr6:32153600-32156200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr6:32153800-32156000 Strong transcription iPS-18 Cell Line embryonic stem cell
18 chr6:32153800-32156000 Genic enhancers Primary T killer memory cells from peripheral blood blood
19 chr6:32153800-32156000 Genic enhancers Duodenum Smooth Muscle Duodenum
20 chr6:32153800-32156000 Genic enhancers Fetal Intestine Large intestine
21 chr6:32153800-32156000 Genic enhancers Fetal Lung lung
22 chr6:32153800-32156000 Strong transcription HMEC breast
23 chr6:32153800-32156200 Genic enhancers Placenta Placenta
24 chr6:32153800-32156200 Genic enhancers Fetal Thymus thymus
25 chr6:32153800-32156400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:32153800-32156400 Genic enhancers Spleen Spleen
27 chr6:32154000-32156000 Strong transcription H1 Cell Line embryonic stem cell
28 chr6:32154000-32156000 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr6:32154000-32156000 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:32154000-32156000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr6:32154000-32156000 Genic enhancers Rectal Mucosa Donor 29 rectum
32 chr6:32154000-32156000 Genic enhancers Skeletal Muscle Female skeletal muscle
33 chr6:32154000-32156200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr6:32154000-32156200 Genic enhancers Lung lung
35 chr6:32154000-32156200 Genic enhancers Skeletal Muscle Male skeletal muscle
36 chr6:32154000-32156200 Genic enhancers K562 blood
37 chr6:32154000-32156600 Genic enhancers Liver Liver
38 chr6:32154200-32156000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr6:32154200-32156000 Genic enhancers Adipose Nuclei Adipose
40 chr6:32154200-32156200 Genic enhancers Cortex derived primary cultured neurospheres brain
41 chr6:32154200-32156400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
42 chr6:32154200-32156400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
43 chr6:32154400-32156000 Strong transcription HUES48 Cell Line embryonic stem cell
44 chr6:32154400-32156000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr6:32154400-32156000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr6:32154400-32156000 Genic enhancers Fetal Brain Female brain
47 chr6:32154400-32156200 Genic enhancers Primary T helper naive cells from peripheral blood blood
48 chr6:32154400-32156200 Genic enhancers Right Ventricle heart
49 chr6:32154400-32156400 Genic enhancers Primary B cells from peripheral blood blood
50 chr6:32154600-32156000 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell

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