Variant report

Variant	rs532398548
Chromosome Location	chr14:31720731-31720732
allele	-/ATAATAGTGCTTCA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901587	chr14:31501505-31752664	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1050054	chr14:31501703-31733642	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	esv2830427	chr14:31639110-32000034	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
4	nsv1050597	chr14:31711248-31904761	Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	esv3402489	chr14:31720621-31720929	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31707800-31730800	Weak transcription	Pancreas	Pancrea
2	chr14:31713800-31720800	Weak transcription	Fetal Intestine Small	intestine
3	chr14:31713800-31722200	Weak transcription	Lung	lung
4	chr14:31720200-31721000	Enhancers	Colonic Mucosa	Colon
5	chr14:31720200-31723800	Enhancers	HepG2	liver
6	chr14:31720400-31721200	Enhancers	Duodenum Mucosa	Duodenum
7	chr14:31720400-31721200	Enhancers	Sigmoid Colon	Sigmoid Colon
8	chr14:31720400-31721400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:31720400-31722600	Enhancers	Stomach Mucosa	stomach
10	chr14:31720600-31721000	Enhancers	Gastric	stomach
11	chr14:31720600-31721000	Enhancers	A549	lung
12	chr14:31720600-31721200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
13	chr14:31720600-31721200	Enhancers	Small Intestine	intestine
14	chr14:31720600-31721200	Enhancers	HMEC	breast
15	chr14:31720600-31721200	Enhancers	K562	blood
16	chr14:31720600-31721200	Enhancers	NHEK	skin
17	chr14:31720600-31721600	Enhancers	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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