Variant report

Variant	rs532413088
Chromosome Location	chr7:150477219-150477220
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:150477211..150477855-chr7:150573375..150574392,3	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608990	chr7:149961274-150707488	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv1017368	chr7:150016952-150655773	Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
3	nsv539195	chr7:150016952-150655773	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
4	nsv1030109	chr7:150312916-150701010	Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
5	nsv967475	chr7:150323577-150610034	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
6	nsv831187	chr7:150325913-150503500	Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
7	nsv522859	chr7:150476888-150486169	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	esv3379909	chr7:150476925-150477413	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150462800-150480800	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr7:150472800-150477600	Weak transcription	Fetal Intestine Small	intestine
3	chr7:150473600-150477400	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr7:150473600-150479000	Weak transcription	Small Intestine	intestine
5	chr7:150475800-150479800	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr7:150476000-150477600	Weak transcription	GM12878-XiMat	blood
7	chr7:150476000-150477800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr7:150476000-150478800	Weak transcription	Rectal Smooth Muscle	rectum
9	chr7:150476000-150481000	Weak transcription	HepG2	liver
10	chr7:150476000-150481400	Weak transcription	A549	lung
11	chr7:150476200-150477400	Weak transcription	Colon Smooth Muscle	Colon
12	chr7:150476200-150477400	Weak transcription	Fetal Muscle Leg	muscle
13	chr7:150476200-150477400	Weak transcription	NHDF-Ad	bronchial
14	chr7:150476200-150478800	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr7:150476200-150479600	Enhancers	Liver	Liver
16	chr7:150476200-150480800	Weak transcription	Fetal Intestine Large	intestine
17	chr7:150476200-150481000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr7:150476200-150481400	Weak transcription	Fetal Muscle Trunk	muscle
19	chr7:150476200-150485200	Weak transcription	Brain Anterior Caudate	brain
20	chr7:150476400-150477400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr7:150476400-150477400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr7:150476400-150477400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr7:150476400-150477400	Weak transcription	Adipose Nuclei	Adipose
24	chr7:150476600-150477400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr7:150476600-150477600	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr7:150477000-150477400	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr7:150477200-150478600	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr7:150477200-150479600	Enhancers	Fetal Stomach	stomach

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