Variant report

Variant	rs532495720
Chromosome Location	chr6:66278816-66278817
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886012	chr6:65905998-66354809	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv886029	chr6:66133281-66333105	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2763559	chr6:66201093-66360660	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv603442	chr6:66221979-66321544	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1027386	chr6:66232296-66291442	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv470825	chr6:66269399-66326945	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv886032	chr6:66278575-66622346	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:66277400-66279200	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr6:66277400-66279200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr6:66277600-66279600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:66278000-66279400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:66278200-66279000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr6:66278600-66279000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr6:66278600-66279000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr6:66278600-66279000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
9	chr6:66278800-66279000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
10	chr6:66278800-66279600	Enhancers	H1 Cell Line	embryonic stem cell
11	chr6:66278800-66279800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr6:66278800-66280400	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr6:66278800-66280600	Enhancers	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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