Variant report

Variant	rs532499453
Chromosome Location	chr16:79965071-79965072
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv573285	chr16:79158182-80127326	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	esv998199	chr16:79964705-79965546	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:79962400-79965600	Weak transcription	Duodenum Mucosa	Duodenum
2	chr16:79964000-79965800	Weak transcription	Fetal Intestine Large	intestine
3	chr16:79964400-79965600	Weak transcription	Rectal Smooth Muscle	rectum
4	chr16:79964400-79967200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr16:79965000-79965600	Weak transcription	Ovary	ovary
6	chr16:79965000-79970200	Weak transcription	Fetal Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links