Variant report

Variant	rs532622324
Chromosome Location	chr9:95722448-95722449
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:95716673..95718561-chr9:95722423..95724467,2	MCF-7	breast:
2	chr9:95722390..95724791-chr9:95916678..95919347,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526296	chr9:95708192-96030392	Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	esv989428	chr9:95722204-95722646	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95715400-95732200	Weak transcription	Fetal Brain Female	brain
2	chr9:95716800-95724000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr9:95717000-95725600	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr9:95717200-95723400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr9:95717200-95724000	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr9:95717200-95724800	Enhancers	Primary T cells fromperipheralblood	blood
7	chr9:95717200-95725800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr9:95717400-95724000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr9:95719000-95723800	Weak transcription	Esophagus	oesophagus
10	chr9:95719600-95725800	Weak transcription	HepG2	liver
11	chr9:95720000-95722600	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr9:95720000-95731400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr9:95720200-95724000	Weak transcription	Pancreas	Pancrea
14	chr9:95721000-95724000	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr9:95721600-95723000	Enhancers	Brain Germinal Matrix	brain
16	chr9:95721600-95724200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
17	chr9:95721600-95725800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr9:95721800-95723800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
19	chr9:95721800-95725800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr9:95722000-95722800	Genic enhancers	Primary T cells from cord blood	blood
21	chr9:95722000-95723400	Enhancers	Primary T killer memory cells from peripheral blood	blood
22	chr9:95722000-95723400	Weak transcription	GM12878-XiMat	blood
23	chr9:95722000-95724400	Enhancers	Primary T helper cells PMA-I stimulated	--
24	chr9:95722200-95726000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr9:95722400-95722600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
26	chr9:95722400-95725600	Weak transcription	Thymus	Thymus

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