The 2.0 version of rSNPBase

Variant report

Variant rs532916173
Chromosome Location chr18:45345295-45345296
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45327400-45358400 Weak transcription HSMMtube muscle
2 chr18:45327600-45352600 Weak transcription Fetal Brain Female brain
3 chr18:45328600-45351600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr18:45332200-45352400 Weak transcription Adipose Nuclei Adipose
5 chr18:45332600-45351800 Weak transcription Fetal Muscle Leg muscle
6 chr18:45332800-45351600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr18:45333000-45357200 Weak transcription Primary hematopoietic stem cells blood
8 chr18:45333200-45345600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr18:45333800-45351600 Weak transcription A549 lung
10 chr18:45334600-45349800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr18:45335400-45365600 Weak transcription Gastric stomach
12 chr18:45335800-45351600 Weak transcription Fetal Thymus thymus
13 chr18:45336400-45351600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr18:45336600-45351600 Weak transcription Thymus Thymus
15 chr18:45337600-45357200 Weak transcription Dnd41 blood
16 chr18:45339600-45359800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr18:45340200-45351800 Weak transcription Fetal Muscle Trunk muscle
18 chr18:45340400-45369400 Weak transcription Fetal Stomach stomach
19 chr18:45340800-45347800 Weak transcription Hela-S3 cervix
20 chr18:45341000-45364200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr18:45341400-45351800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr18:45342000-45345400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr18:45342200-45384200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr18:45342400-45353800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr18:45342400-45365400 Weak transcription Psoas Muscle Psoas
26 chr18:45342600-45349200 Weak transcription Primary T cells from cord blood blood
27 chr18:45342600-45351600 Weak transcription Left Ventricle heart
28 chr18:45343200-45351600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr18:45343400-45351800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr18:45343600-45345400 Enhancers HUES6 Cell Line embryonic stem cell
31 chr18:45343800-45351600 Weak transcription Lung lung
32 chr18:45344000-45361400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr18:45344000-45373000 Weak transcription Pancreas Pancrea
34 chr18:45344200-45364800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr18:45344200-45364800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr18:45344400-45345400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
37 chr18:45344400-45359800 Weak transcription NHDF-Ad bronchial
38 chr18:45344400-45365400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr18:45344400-45365600 Weak transcription Stomach Smooth Muscle stomach
40 chr18:45344600-45345400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr18:45344600-45351600 Weak transcription Fetal Lung lung
42 chr18:45344600-45358400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr18:45344600-45365400 Weak transcription H9 Cell Line embryonic stem cell
44 chr18:45344600-45368000 Weak transcription Rectal Smooth Muscle rectum
45 chr18:45344800-45352400 Weak transcription H1 Cell Line embryonic stem cell
46 chr18:45344800-45362400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr18:45345000-45351600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr18:45345000-45351600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr18:45345000-45352600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr18:45345000-45358400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015