Variant report

Variant	rs532950413
Chromosome Location	chr14:68991279-68991280
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68990548..68993032-chr14:69095034..69097852,2	MCF-7	breast:
2	chr14:68990793..68991332-chr14:69122376..69122983,2	MCF-7	breast:
3	chr14:68987315..68991799-chr14:69260586..69263580,4	MCF-7	breast:
4	chr14:68990794..68994075-chr14:69256455..69260885,5	MCF-7	breast:
5	chr14:68715321..68716856-chr14:68989735..68992199,2	MCF-7	breast:
6	chr14:68989438..68991863-chr14:69015676..69017457,2	MCF-7	breast:
7	chr14:68987292..68989067-chr14:68991224..68994887,5	MCF-7	breast:
8	chr14:68990353..68991309-chr14:69036602..69037256,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000259038	Chromatin interaction
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv832822	chr14:68874640-69060272	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1048064	chr14:68991041-69012766	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68983800-68991600	Enhancers	Fetal Muscle Leg	muscle
2	chr14:68983800-68991800	Enhancers	Fetal Stomach	stomach
3	chr14:68984200-68991800	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr14:68984600-68991400	Enhancers	Placenta Amnion	Placenta Amnion
5	chr14:68984600-68991600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:68984600-68991800	Enhancers	Placenta	Placenta
7	chr14:68985800-68994800	Weak transcription	Aorta	Aorta
8	chr14:68986000-68991800	Enhancers	Rectal Smooth Muscle	rectum
9	chr14:68986000-68993400	Weak transcription	Brain Angular Gyrus	brain
10	chr14:68986400-68991600	Enhancers	Colon Smooth Muscle	Colon
11	chr14:68986400-68993000	Weak transcription	NH-A	brain
12	chr14:68987000-68991600	Weak transcription	Thymus	Thymus
13	chr14:68987400-68991800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr14:68987400-68993600	Enhancers	HSMM	muscle
15	chr14:68987400-68996200	Enhancers	Pancreas	Pancrea
16	chr14:68987600-68991400	Enhancers	Esophagus	oesophagus
17	chr14:68987600-68992000	Enhancers	NHLF	lung
18	chr14:68987600-68993400	Enhancers	Muscle Satellite Cultured Cells	--
19	chr14:68987800-68991800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr14:68987800-68991800	Enhancers	Fetal Kidney	kidney
21	chr14:68988000-68991400	Enhancers	Adipose Nuclei	Adipose
22	chr14:68988000-68991800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr14:68988200-68992000	Enhancers	NHDF-Ad	bronchial
24	chr14:68988200-68993600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr14:68988400-68991400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr14:68988400-68991800	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr14:68988400-68993400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr14:68988600-68991400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr14:68988600-68993800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
30	chr14:68988800-68991800	Weak transcription	Hela-S3	cervix
31	chr14:68988800-68993400	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr14:68989000-68993000	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr14:68989200-68991600	Weak transcription	Lung	lung
34	chr14:68989200-68993200	Weak transcription	Psoas Muscle	Psoas
35	chr14:68989400-68993000	Weak transcription	A549	lung
36	chr14:68989600-68991400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr14:68989600-68991400	Enhancers	Ovary	ovary
38	chr14:68989600-68993000	Weak transcription	Stomach Mucosa	stomach
39	chr14:68989600-68993000	Weak transcription	HMEC	breast
40	chr14:68989600-68993200	Weak transcription	Gastric	stomach
41	chr14:68989800-68993000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr14:68989800-68993800	Weak transcription	Primary B cells from cord blood	blood
43	chr14:68990000-68994200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr14:68990000-68995400	Weak transcription	HUES64 Cell Line	embryonic stem cell
45	chr14:68990000-68995600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr14:68990000-68996000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
47	chr14:68990200-68991800	Enhancers	Stomach Smooth Muscle	stomach
48	chr14:68990200-68993200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr14:68990200-68993200	Weak transcription	Brain Anterior Caudate	brain
50	chr14:68990200-68993200	Weak transcription	Rectal Mucosa Donor 29	rectum

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