Variant report

Variant	rs533049432
Chromosome Location	chr6:44510517-44510518
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44510267..44512106-chr6:44515045..44516562,2	K562	blood:
2	chr6:44504867..44507271-chr6:44510365..44512110,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5283	chr6:44505982-44517131	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3499026	chr6:44510424-44516522	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44509000-44511200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr6:44509200-44511600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:44509400-44510600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr6:44509400-44510600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr6:44509400-44511000	Enhancers	H1 Cell Line	embryonic stem cell
6	chr6:44509400-44511000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:44509400-44511000	Enhancers	HSMMtube	muscle
8	chr6:44509400-44511400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr6:44509600-44510800	Enhancers	Fetal Lung	lung
10	chr6:44509600-44511000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr6:44509600-44511000	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr6:44509600-44511200	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr6:44509800-44510600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:44509800-44510600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:44509800-44510800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr6:44509800-44511000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr6:44509800-44513000	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr6:44510000-44510600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr6:44510000-44510600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr6:44510000-44510600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr6:44510000-44510600	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
22	chr6:44510000-44510600	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr6:44510000-44510600	Flanking Active TSS	NH-A	brain
24	chr6:44510000-44510600	Active TSS	NHLF	lung
25	chr6:44510000-44511000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
26	chr6:44510200-44510600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr6:44510200-44510600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr6:44510200-44510600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
29	chr6:44510200-44510600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
30	chr6:44510200-44510600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr6:44510200-44510600	Flanking Active TSS	Brain Anterior Caudate	brain
32	chr6:44510200-44510600	Flanking Active TSS	Brain Germinal Matrix	brain
33	chr6:44510200-44510600	Bivalent/Poised TSS	Fetal Brain Female	brain
34	chr6:44510200-44510600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
35	chr6:44510200-44510600	Flanking Active TSS	Ovary	ovary
36	chr6:44510200-44510600	Bivalent Enhancer	HepG2	liver
37	chr6:44510200-44510800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
38	chr6:44510200-44510800	Active TSS	Right Atrium	heart
39	chr6:44510200-44511000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
40	chr6:44510200-44511400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr6:44510200-44511600	Enhancers	Psoas Muscle	Psoas
42	chr6:44510400-44510600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr6:44510400-44510600	Flanking Active TSS	Adipose Nuclei	Adipose
44	chr6:44510400-44510600	Flanking Active TSS	Brain Hippocampus Middle	brain
45	chr6:44510400-44510600	Flanking Active TSS	NHDF-Ad	bronchial
46	chr6:44510400-44510600	Flanking Active TSS	Osteobl	bone
47	chr6:44510400-44510800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr6:44510400-44510800	Enhancers	Fetal Kidney	kidney

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