Variant report

Variant	rs533218359
Chromosome Location	chr9:16190672-16190673
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949463	chr9:15970668-16377360	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv429999	chr9:16102066-16389100	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv892639	chr9:16190403-16242088	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:16179800-16192000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:16185200-16193600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:16185600-16192200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr9:16185600-16196400	Weak transcription	Aorta	Aorta
5	chr9:16187800-16191400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr9:16189800-16192000	Weak transcription	Primary T cells from cord blood	blood
7	chr9:16190000-16190800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr9:16190000-16191200	Weak transcription	HSMMtube	muscle
9	chr9:16190000-16193000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr9:16190600-16192000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr9:16190600-16193600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr9:16190600-16193800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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