The 2.0 version of rSNPBase

Variant report

Variant rs533223598
Chromosome Location chr16:69977489-69977490
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69959000-69977600 Strong transcription Primary T cells from cord blood blood
2 chr16:69970800-69978800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr16:69974600-69978000 Weak transcription NH-A brain
4 chr16:69974600-69986600 Weak transcription HepG2 liver
5 chr16:69975000-69977600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr16:69975000-69985200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr16:69975200-69978200 Weak transcription Placenta Amnion Placenta Amnion
8 chr16:69975400-69977600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr16:69975400-69978200 Weak transcription Stomach Smooth Muscle stomach
10 chr16:69975400-69978400 Weak transcription Small Intestine intestine
11 chr16:69975600-69977800 Weak transcription Brain Angular Gyrus brain
12 chr16:69975600-69977800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr16:69975600-69978600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr16:69975600-69985200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr16:69975800-69977600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr16:69975800-69977600 Weak transcription Pancreas Pancrea
17 chr16:69975800-69978200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr16:69976000-69977600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr16:69976000-69977600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr16:69976000-69977600 Weak transcription Osteobl bone
21 chr16:69976000-69977800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr16:69976000-69978200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr16:69976000-69979400 Weak transcription Lung lung
24 chr16:69976000-69982200 Weak transcription Brain Hippocampus Middle brain
25 chr16:69976200-69977800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr16:69976200-69978000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr16:69976200-69978000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr16:69976200-69978600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr16:69976200-69979200 Weak transcription Gastric stomach
30 chr16:69976200-69984200 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr16:69976400-69977600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr16:69976400-69978000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr16:69976400-69978000 Weak transcription Esophagus oesophagus
34 chr16:69976400-69978000 Weak transcription Thymus Thymus
35 chr16:69976400-69978200 Enhancers Fetal Muscle Leg muscle
36 chr16:69976400-69978800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr16:69976600-69977600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr16:69976600-69978200 Weak transcription Fetal Brain Female brain
39 chr16:69976800-69977600 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr16:69976800-69978200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr16:69976800-69978400 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr16:69976800-69978600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr16:69976800-69979800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr16:69976800-69998600 Weak transcription Spleen Spleen
45 chr16:69977000-69977600 Enhancers Fetal Stomach stomach
46 chr16:69977000-69978800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr16:69977200-69978800 Weak transcription Primary B cells from peripheral blood blood
48 chr16:69977200-69979000 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr16:69977200-69979000 Weak transcription Fetal Intestine Large intestine
50 chr16:69977200-69979000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015