Variant report

Variant	rs533256385
Chromosome Location	chr5:114622028-114622029
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:114619634..114629040-chr5:114629951..114633566,14	MCF-7	breast:
2	chr5:114619029..114622106-chr5:114630499..114633053,3	K562	blood:
3	chr5:114618112..114620464-chr5:114620662..114622678,3	K562	blood:

Variant related genes	Relation type
ENSG00000164221	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv968978	chr5:114620599-114625007	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114599000-114624000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr5:114599000-114626600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr5:114599000-114630800	Weak transcription	Psoas Muscle	Psoas
4	chr5:114599000-114631200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr5:114599000-114631200	Weak transcription	HSMM	muscle
6	chr5:114599000-114631400	Weak transcription	Left Ventricle	heart
7	chr5:114599200-114631200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr5:114601200-114631200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr5:114601200-114631400	Weak transcription	Aorta	Aorta
10	chr5:114604000-114622400	Weak transcription	NHDF-Ad	bronchial
11	chr5:114604000-114630600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:114611200-114630400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr5:114611200-114630400	Weak transcription	Duodenum Mucosa	Duodenum
14	chr5:114611200-114630800	Weak transcription	Stomach Smooth Muscle	stomach
15	chr5:114611400-114624200	Weak transcription	Monocytes-CD14+_RO01746	blood
16	chr5:114611400-114627600	Weak transcription	Primary B cells from cord blood	blood
17	chr5:114611400-114628600	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr5:114611600-114622200	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr5:114611600-114623200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
20	chr5:114612400-114625000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
21	chr5:114612800-114622400	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr5:114612800-114630200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr5:114620000-114622800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr5:114621200-114622400	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr5:114621400-114622200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
26	chr5:114621400-114628600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr5:114621600-114622200	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr5:114621600-114628400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr5:114621600-114630400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr5:114621800-114622200	Enhancers	Brain Hippocampus Middle	brain
31	chr5:114621800-114622400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr5:114622000-114622200	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr5:114622000-114622200	Enhancers	Colon Smooth Muscle	Colon

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