Variant report

Variant rs533346256
Chromosome Location chr12:39845808-39845809
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:39843600-39847200 Enhancers Cortex derived primary cultured neurospheres brain
2 chr12:39843800-39847200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr12:39844600-39846200 Enhancers ES-I3 Cell Line embryonic stem cell
4 chr12:39844600-39847200 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr12:39844800-39846000 Enhancers HUES6 Cell Line embryonic stem cell
6 chr12:39844800-39846000 Enhancers iPS-20b Cell Line embryonic stem cell
7 chr12:39844800-39847000 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr12:39844800-39847200 Enhancers HUES64 Cell Line embryonic stem cell
9 chr12:39845000-39846000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:39845000-39846400 Weak transcription Fetal Brain Male brain
11 chr12:39845400-39847000 Enhancers Brain Germinal Matrix brain
12 chr12:39845600-39846200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
13 chr12:39845800-39846000 Enhancers H1 Cell Line embryonic stem cell

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