Variant report

Variant	rs533347868
Chromosome Location	chr5:57954344-57954345
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830363	chr5:57893949-58555491	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1029145	chr5:57905821-58141221	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv830311	chr5:57912546-58105636	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1020937	chr5:57938969-57959918	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv4845	chr5:57949493-57994156	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2760929	chr5:57952586-57959954	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1806916	chr5:57954311-57959223	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1807554	chr5:57954311-57959223	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv437464	chr5:57954311-57961405	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv437465	chr5:57954311-57961405	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv965588	chr5:57954339-57961148	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57954000-57954600	Enhancers	Primary hematopoietic stem cells	blood
2	chr5:57954000-57954600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr5:57954000-57954800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr5:57954200-57954800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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