The 2.0 version of rSNPBase

Variant report

Variant rs533349069
Chromosome Location chr15:57226053-57226054
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57212400-57230400 Weak transcription Lung lung
2 chr15:57212400-57233400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:57212400-57256000 Weak transcription Pancreas Pancrea
4 chr15:57212600-57241000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr15:57212800-57227200 Weak transcription Fetal Muscle Trunk muscle
6 chr15:57213000-57227400 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:57213200-57256000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr15:57213400-57226800 Weak transcription Brain Germinal Matrix brain
9 chr15:57215600-57227400 Weak transcription Fetal Brain Female brain
10 chr15:57216400-57241800 Weak transcription Fetal Brain Male brain
11 chr15:57220200-57226200 Enhancers Primary T helper cells fromperipheralblood blood
12 chr15:57220400-57226800 Enhancers Primary T helper naive cells fromperipheralblood blood
13 chr15:57220400-57236400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr15:57220800-57226200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr15:57221000-57226600 Enhancers Fetal Intestine Small intestine
16 chr15:57221200-57226600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:57221400-57226600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr15:57221400-57227200 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr15:57221600-57226400 Enhancers Rectal Mucosa Donor 31 rectum
20 chr15:57221600-57226600 Weak transcription HSMMtube muscle
21 chr15:57221800-57226800 Enhancers Brain Anterior Caudate brain
22 chr15:57222200-57226200 Weak transcription NHEK skin
23 chr15:57222400-57227000 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr15:57222400-57227400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr15:57222400-57229600 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr15:57222400-57231200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr15:57222600-57226600 Enhancers Primary T helper cells PMA-I stimulated --
28 chr15:57222600-57228800 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr15:57222600-57229000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr15:57222600-57231200 Weak transcription Osteobl bone
31 chr15:57222600-57231800 Weak transcription HSMM muscle
32 chr15:57222600-57233000 Weak transcription Right Ventricle heart
33 chr15:57222600-57250200 Weak transcription NH-A brain
34 chr15:57222800-57231800 Weak transcription Primary monocytes fromperipheralblood blood
35 chr15:57222800-57232600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr15:57222800-57240800 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr15:57222800-57255000 Weak transcription HMEC breast
38 chr15:57223000-57226200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr15:57223000-57227400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr15:57223000-57236800 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr15:57223200-57226400 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr15:57223200-57226600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr15:57223200-57226600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr15:57223200-57227000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr15:57223200-57227400 Enhancers Brain Hippocampus Middle brain
46 chr15:57223200-57227400 Weak transcription Placenta Placenta
47 chr15:57223200-57230800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr15:57223200-57240400 Weak transcription Aorta Aorta
49 chr15:57223600-57226400 Active TSS Thymus Thymus
50 chr15:57224200-57231000 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015