Variant report

Variant	rs533539326
Chromosome Location	chr4:171948044-171948045
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv881345	chr4:171673765-172228547	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1018793	chr4:171808272-172395180	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv881662	chr4:171842726-171957000	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv822828	chr4:171947856-171949040	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171944600-171949000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr4:171945400-171948200	Enhancers	Primary hematopoietic stem cells	blood
3	chr4:171946200-171949000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr4:171946400-171949200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr4:171946400-171950200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr4:171946400-171954800	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr4:171947200-171949200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr4:171947400-171949200	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr4:171947400-171949600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr4:171947400-171949600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr4:171948000-171949400	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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