The 2.0 version of rSNPBase

Variant report

Variant rs533729511
Chromosome Location chr3:141235394-141235395
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141207000-141235800 Weak transcription Gastric stomach
2 chr3:141207000-141255000 Weak transcription Aorta Aorta
3 chr3:141207800-141235600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr3:141210400-141248000 Weak transcription NHLF lung
5 chr3:141211400-141235400 Weak transcription A549 lung
6 chr3:141216000-141239600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr3:141217800-141235800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:141217800-141258400 Weak transcription Psoas Muscle Psoas
9 chr3:141218000-141235400 Weak transcription NHEK skin
10 chr3:141218200-141235600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:141218600-141235400 Weak transcription Brain Germinal Matrix brain
12 chr3:141218800-141235600 Weak transcription Left Ventricle heart
13 chr3:141219000-141235400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr3:141219000-141235600 Weak transcription Fetal Intestine Small intestine
15 chr3:141221000-141235600 Weak transcription Fetal Muscle Trunk muscle
16 chr3:141221200-141235400 Weak transcription Rectal Smooth Muscle rectum
17 chr3:141221600-141235600 Weak transcription Fetal Stomach stomach
18 chr3:141221800-141235400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr3:141226200-141235600 Weak transcription Thymus Thymus
20 chr3:141226400-141235400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr3:141226600-141235600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr3:141226600-141235600 Weak transcription Pancreas Pancrea
23 chr3:141226600-141235600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:141226600-141235800 Weak transcription Brain Angular Gyrus brain
25 chr3:141226600-141236200 Weak transcription Brain Substantia Nigra brain
26 chr3:141226600-141254400 Weak transcription Brain Cingulate Gyrus brain
27 chr3:141226800-141235400 Weak transcription HepG2 liver
28 chr3:141227400-141242800 Weak transcription Ovary ovary
29 chr3:141227600-141235800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:141227600-141236200 Weak transcription Lung lung
31 chr3:141228400-141246600 Strong transcription Dnd41 blood
32 chr3:141229000-141236200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr3:141229200-141235400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr3:141229200-141236200 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr3:141229400-141235600 Strong transcription Primary B cells from cord blood blood
36 chr3:141229400-141267400 Weak transcription Fetal Heart heart
37 chr3:141229800-141235400 Weak transcription Placenta Placenta
38 chr3:141229800-141235400 Weak transcription K562 blood
39 chr3:141230000-141235400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr3:141230000-141235800 Weak transcription Colonic Mucosa Colon
41 chr3:141230000-141235800 Weak transcription Esophagus oesophagus
42 chr3:141230000-141235800 Weak transcription NHDF-Ad bronchial
43 chr3:141230000-141236400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:141230000-141259800 Weak transcription Small Intestine intestine
45 chr3:141230400-141243000 Weak transcription Spleen Spleen
46 chr3:141230600-141235400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr3:141231000-141236200 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr3:141231000-141243000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr3:141231200-141237000 Strong transcription Primary T cells fromperipheralblood blood
50 chr3:141231200-141240200 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015