The 2.0 version of rSNPBase

Variant report

Variant rs533756
Chromosome Location chr3:146187121-146187122
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:146185800-146187200 Enhancers Fetal Lung lung
2 chr3:146185800-146187200 Weak transcription Psoas Muscle Psoas
3 chr3:146185800-146187200 Enhancers NHLF lung
4 chr3:146186400-146187200 Flanking Active TSS A549 lung
5 chr3:146186400-146187600 Flanking Active TSS Osteobl bone
6 chr3:146186400-146188800 Active TSS Rectal Mucosa Donor 31 rectum
7 chr3:146186600-146187200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
8 chr3:146186600-146187200 Flanking Active TSS Fetal Stomach stomach
9 chr3:146186600-146187600 Active TSS Primary T helper cells PMA-I stimulated --
10 chr3:146186600-146188000 Active TSS iPS-15b Cell Line embryonic stem cell
11 chr3:146186600-146188000 Active TSS Primary T cells from cord blood blood
12 chr3:146186600-146188000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:146186600-146188600 Active TSS Duodenum Mucosa Duodenum
14 chr3:146186800-146187200 Active TSS H1 Cell Line embryonic stem cell
15 chr3:146186800-146187200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr3:146186800-146187200 Flanking Active TSS Brain Hippocampus Middle brain
17 chr3:146186800-146187200 Flanking Active TSS Fetal Thymus thymus
18 chr3:146186800-146187200 Flanking Active TSS K562 blood
19 chr3:146186800-146187400 Active TSS Primary B cells from cord blood blood
20 chr3:146186800-146187400 Flanking Active TSS Fetal Muscle Leg muscle
21 chr3:146186800-146187600 Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr3:146186800-146187600 Flanking Active TSS Pancreas Pancrea
23 chr3:146186800-146187800 Active TSS Primary T helper naive cells fromperipheralblood blood
24 chr3:146186800-146187800 Active TSS Primary T killer naive cells fromperipheralblood blood
25 chr3:146186800-146187800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:146186800-146187800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:146186800-146187800 Active TSS Liver Liver
28 chr3:146186800-146187800 Active TSS Colonic Mucosa Colon
29 chr3:146186800-146187800 Active TSS Fetal Intestine Large intestine
30 chr3:146186800-146187800 Active TSS Fetal Intestine Small intestine
31 chr3:146186800-146188000 Active TSS HUES64 Cell Line embryonic stem cell
32 chr3:146186800-146188000 Active TSS Breast Myoepithelial Primary Cells Breast
33 chr3:146186800-146188000 Flanking Active TSS Primary B cells from peripheral blood blood
34 chr3:146186800-146188000 Flanking Active TSS Primary T cells fromperipheralblood blood
35 chr3:146186800-146188000 Active TSS Primary T helper naive cells from peripheral blood blood
36 chr3:146186800-146188000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
37 chr3:146186800-146188000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
38 chr3:146186800-146188000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:146186800-146188000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr3:146186800-146188000 Active TSS Brain Angular Gyrus brain
41 chr3:146186800-146188000 Active TSS Brain Anterior Caudate brain
42 chr3:146186800-146188000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
43 chr3:146186800-146188000 Active TSS Fetal Kidney kidney
44 chr3:146186800-146188000 Active TSS Pancreatic Islets Pancreatic Islet
45 chr3:146187000-146187200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:146187000-146187200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
47 chr3:146187000-146187200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:146187000-146187200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr3:146187000-146187200 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr3:146187000-146187200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015