The 2.0 version of rSNPBase

Variant report

Variant rs533756574
Chromosome Location chr4:107001029-107001030
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106984000-107010200 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr4:106985000-107011400 Weak transcription HepG2 liver
3 chr4:106986800-107002400 Weak transcription Stomach Smooth Muscle stomach
4 chr4:106993000-107008800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:106993200-107010000 Weak transcription Left Ventricle heart
6 chr4:106993400-107010400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr4:106993600-107002400 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr4:106993600-107010000 Weak transcription Right Ventricle heart
9 chr4:106993800-107010800 Weak transcription Placenta Amnion Placenta Amnion
10 chr4:106994600-107015000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr4:106994800-107011600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr4:106995000-107004200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr4:106995200-107010000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:106995200-107011400 Weak transcription Colonic Mucosa Colon
15 chr4:106995400-107004000 Weak transcription Fetal Stomach stomach
16 chr4:106995400-107004200 Weak transcription Thymus Thymus
17 chr4:106995400-107011000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr4:106995400-107011000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:106995600-107010400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr4:106996000-107010800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr4:106996200-107003800 Weak transcription Pancreas Pancrea
22 chr4:106997200-107031000 Weak transcription Psoas Muscle Psoas
23 chr4:106997400-107004000 Weak transcription Gastric stomach
24 chr4:106998000-107004400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
25 chr4:106998000-107010000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr4:106998200-107002200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr4:106998600-107002400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr4:106998600-107002600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr4:106998600-107004600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr4:106998600-107010200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr4:106998600-107010600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr4:106998600-107010800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:106999000-107002200 Weak transcription Primary T cells from cord blood blood
34 chr4:106999000-107002400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr4:106999000-107002600 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr4:106999000-107004000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr4:106999000-107011000 Weak transcription Brain Cingulate Gyrus brain
38 chr4:106999000-107011800 Weak transcription Fetal Heart heart
39 chr4:106999000-107012000 Weak transcription NHDF-Ad bronchial
40 chr4:106999200-107001400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr4:106999200-107002200 Weak transcription Brain Hippocampus Middle brain
42 chr4:106999200-107002400 Weak transcription Fetal Kidney kidney
43 chr4:106999200-107010000 Weak transcription Fetal Brain Male brain
44 chr4:106999200-107010400 Weak transcription HSMM muscle
45 chr4:106999400-107001200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr4:106999400-107002600 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr4:106999400-107002600 Weak transcription Duodenum Mucosa Duodenum
48 chr4:106999400-107004200 Weak transcription Fetal Muscle Trunk muscle
49 chr4:106999600-107002400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr4:106999600-107004000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015