The 2.0 version of rSNPBase

Variant report

Variant rs533776817
Chromosome Location chr1:185191647-185191648
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185127400-185192000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:185127600-185218200 Weak transcription Right Ventricle heart
3 chr1:185128400-185193800 Weak transcription Brain Angular Gyrus brain
4 chr1:185128400-185201800 Weak transcription Gastric stomach
5 chr1:185134600-185193200 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:185138000-185204000 Weak transcription Colon Smooth Muscle Colon
7 chr1:185148400-185193400 Weak transcription Fetal Thymus thymus
8 chr1:185151000-185193200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:185152200-185200800 Weak transcription Primary T cells fromperipheralblood blood
10 chr1:185160000-185192600 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:185160800-185192000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:185168000-185201800 Weak transcription Primary T cells from cord blood blood
13 chr1:185168400-185192200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:185170400-185192000 Weak transcription Fetal Intestine Large intestine
15 chr1:185170800-185192600 Weak transcription Brain Cingulate Gyrus brain
16 chr1:185170800-185199800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:185170800-185218200 Weak transcription Pancreas Pancrea
18 chr1:185171400-185192000 Weak transcription Fetal Brain Female brain
19 chr1:185171400-185193200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:185174000-185207200 Weak transcription NHDF-Ad bronchial
21 chr1:185175600-185192000 Weak transcription Duodenum Mucosa Duodenum
22 chr1:185175600-185217000 Weak transcription Fetal Stomach stomach
23 chr1:185177600-185192800 Weak transcription Primary B cells from cord blood blood
24 chr1:185177800-185202600 Weak transcription Fetal Kidney kidney
25 chr1:185178400-185208600 Weak transcription Small Intestine intestine
26 chr1:185180400-185191800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:185182400-185192200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:185183800-185199400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:185184200-185192800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:185185200-185197800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:185185400-185194000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:185185600-185193400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:185186000-185193000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:185186200-185194200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:185188400-185197600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:185189400-185193000 Weak transcription HSMMtube muscle
37 chr1:185190000-185192800 Weak transcription Esophagus oesophagus
38 chr1:185190000-185193000 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:185190200-185192000 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:185190200-185192800 Strong transcription Adipose Nuclei Adipose
41 chr1:185190200-185204200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:185190400-185192400 Weak transcription Thymus Thymus
43 chr1:185190400-185192800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:185190600-185193200 Strong transcription Placenta Placenta
45 chr1:185190600-185201600 Weak transcription Spleen Spleen
46 chr1:185190800-185192200 Weak transcription Primary monocytes fromperipheralblood blood
47 chr1:185190800-185192400 Strong transcription Primary B cells from peripheral blood blood
48 chr1:185190800-185192400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:185190800-185192800 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr1:185191000-185192600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015