Variant report

Variant	rs533801049
Chromosome Location	chr13:95619579-95619580
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95619254..95622585-chr13:95624903..95627476,4	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv274954	chr13:95617339-95621812	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3405940	chr13:95618976-95621724	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95616400-95619600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr13:95618400-95619600	Enhancers	Brain Germinal Matrix	brain
3	chr13:95618400-95619600	Bivalent Enhancer	Brain Hippocampus Middle	brain
4	chr13:95618600-95619600	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr13:95618800-95619600	Enhancers	Brain Cingulate Gyrus	brain
6	chr13:95619000-95619600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr13:95619000-95619600	Weak transcription	Pancreas	Pancrea
8	chr13:95619200-95619600	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
9	chr13:95619200-95619600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr13:95619200-95619600	Weak transcription	Brain Substantia Nigra	brain
11	chr13:95619200-95620200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
12	chr13:95619400-95619600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr13:95619400-95619600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
14	chr13:95619400-95619600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr13:95619400-95619600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr13:95619400-95619800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
17	chr13:95619400-95619800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
18	chr13:95619400-95619800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
19	chr13:95619400-95619800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
20	chr13:95619400-95620000	Bivalent/Poised TSS	Brain Anterior Caudate	brain
21	chr13:95619400-95621000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr13:95619400-95621200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr13:95619400-95621200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr13:95619400-95621200	Active TSS	A549	lung

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