Variant report

Variant	rs533947423
Chromosome Location	chr5:74443059-74443060
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018865	chr5:74246293-74494552	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv882189	chr5:74356857-74478078	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1016610	chr5:74403611-74627654	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv2758000	chr5:74433760-74611714	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	esv2759350	chr5:74433760-74611714	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
6	esv3360153	chr5:74442618-74443122	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74439600-74449000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr5:74440400-74448000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:74441600-74443800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:74441800-74443400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr5:74441800-74443800	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr5:74441800-74444600	Enhancers	Primary T cells from cord blood	blood
7	chr5:74441800-74444600	Enhancers	Primary hematopoietic stem cells	blood
8	chr5:74442000-74443200	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr5:74442000-74443200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr5:74442200-74443200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr5:74442200-74443200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
12	chr5:74442400-74443800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr5:74442600-74443600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr5:74442600-74443800	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr5:74442600-74443800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr5:74443000-74444000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
17	chr5:74443000-74444000	Weak transcription	Thymus	Thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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