Variant report

Variant rs533958034
Chromosome Location chr17:17686081-17686082
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17678200-17687600 Weak transcription Hela-S3 cervix
2 chr17:17682200-17687200 Weak transcription HSMMtube muscle
3 chr17:17683600-17686200 Enhancers Liver Liver
4 chr17:17683800-17686200 Enhancers GM12878-XiMat blood
5 chr17:17684000-17686200 Enhancers Lung lung
6 chr17:17684200-17687600 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr17:17684200-17688000 Active TSS H9 Cell Line embryonic stem cell
8 chr17:17684200-17688000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr17:17684200-17688200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr17:17684400-17686200 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
11 chr17:17684400-17686800 Weak transcription Fetal Kidney kidney
12 chr17:17684400-17687200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr17:17684400-17687200 Flanking Active TSS HMEC breast
14 chr17:17684400-17688200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr17:17684600-17686200 Bivalent Enhancer Stomach Mucosa stomach
16 chr17:17684600-17687800 Flanking Active TSS Primary hematopoietic stem cells blood
17 chr17:17684800-17686200 Weak transcription K562 blood
18 chr17:17684800-17687400 Active TSS ES-WA7 Cell Line embryonic stem cell
19 chr17:17684800-17687400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr17:17684800-17687600 Active TSS HUES6 Cell Line embryonic stem cell
21 chr17:17684800-17687600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
22 chr17:17684800-17687800 Active TSS iPS-15b Cell Line embryonic stem cell
23 chr17:17684800-17688400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr17:17685000-17686200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
25 chr17:17685000-17686200 Flanking Bivalent TSS/Enh Thymus Thymus
26 chr17:17685000-17687000 Active TSS Breast Myoepithelial Primary Cells Breast
27 chr17:17685000-17687000 Active TSS Primary T helper naive cells fromperipheralblood blood
28 chr17:17685000-17687200 Active TSS Primary T cells from cord blood blood
29 chr17:17685000-17687400 Flanking Active TSS HUVEC blood vessel
30 chr17:17685000-17687600 Active TSS Aorta Aorta
31 chr17:17685000-17687600 Active TSS Pancreatic Islets Pancreatic Islet
32 chr17:17685000-17687600 Active TSS Ovary ovary
33 chr17:17685000-17687800 Flanking Active TSS Colonic Mucosa Colon
34 chr17:17685000-17688000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
35 chr17:17685200-17686200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr17:17685200-17686200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr17:17685200-17686200 Weak transcription Gastric stomach
38 chr17:17685200-17686200 Weak transcription NHDF-Ad bronchial
39 chr17:17685200-17686400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
40 chr17:17685200-17686600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr17:17685200-17686800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr17:17685200-17686800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr17:17685200-17686800 Active TSS Brain Hippocampus Middle brain
44 chr17:17685200-17686800 Active TSS Right Atrium heart
45 chr17:17685200-17686800 Active TSS Osteobl bone
46 chr17:17685200-17687000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr17:17685200-17687000 Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr17:17685200-17687000 Active TSS Psoas Muscle Psoas
49 chr17:17685200-17687000 Active TSS Skeletal Muscle Female skeletal muscle
50 chr17:17685200-17687000 Active TSS HepG2 liver

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