Variant report

Variant	rs534049547
Chromosome Location	chr11:45591207-45591208
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897310	chr11:45487041-45631953	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3352980	chr11:45590176-45593574	Enhancers Flanking Active TSS Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45585800-45598000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:45589000-45591400	Enhancers	Fetal Muscle Leg	muscle
3	chr11:45590200-45591400	Enhancers	Fetal Muscle Trunk	muscle
4	chr11:45590400-45592200	Enhancers	Fetal Brain Male	brain
5	chr11:45590800-45592600	Weak transcription	Spleen	Spleen
6	chr11:45591000-45591600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr11:45591000-45591600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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