| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1004451 |
chr1:74107125-74874389 |
Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv534999 |
chr1:74107125-74874389 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv522147 |
chr1:74338530-74983835 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1398 |
chr1:74353390-74398380 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
esv2763561 |
chr1:74362009-74396896 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
