Variant report

Variant rs534482520
Chromosome Location chr1:10697841-10697842
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10632600-10698000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:10664400-10698000 Weak transcription Primary B cells from cord blood blood
4 chr1:10685200-10699400 Weak transcription Aorta Aorta
5 chr1:10686200-10698000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:10687600-10698000 Weak transcription Small Intestine intestine
7 chr1:10691400-10698000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:10691600-10703000 Weak transcription Primary B cells from peripheral blood blood
9 chr1:10691600-10706000 Weak transcription Dnd41 blood
10 chr1:10692400-10699400 Weak transcription Duodenum Mucosa Duodenum
11 chr1:10692600-10698400 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:10693200-10699400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:10693600-10698000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:10694400-10699400 Weak transcription Liver Liver
15 chr1:10694600-10698400 Weak transcription NHLF lung
16 chr1:10695400-10698200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:10695800-10700400 Strong transcription Fetal Intestine Small intestine
18 chr1:10696000-10699400 Weak transcription Pancreas Pancrea
19 chr1:10696000-10699600 Weak transcription Fetal Heart heart
20 chr1:10696200-10698200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:10696200-10698400 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr1:10696200-10698600 Weak transcription Left Ventricle heart
23 chr1:10696200-10704000 Weak transcription HSMMtube muscle
24 chr1:10696400-10698200 Weak transcription Right Atrium heart
25 chr1:10696400-10698200 Weak transcription Right Ventricle heart
26 chr1:10696400-10699600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr1:10696600-10698200 Weak transcription Psoas Muscle Psoas
28 chr1:10696600-10698600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:10696600-10698800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:10696600-10699400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:10696800-10698400 Enhancers NHEK skin
32 chr1:10697200-10698200 Bivalent Enhancer Fetal Muscle Leg muscle
33 chr1:10697200-10698400 Enhancers Skeletal Muscle Male skeletal muscle
34 chr1:10697400-10698000 Enhancers Stomach Smooth Muscle stomach
35 chr1:10697400-10698200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:10697400-10698200 Bivalent Enhancer Placenta Placenta
37 chr1:10697400-10698400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:10697400-10698400 Enhancers Primary T helper cells fromperipheralblood blood
39 chr1:10697400-10698400 Bivalent Enhancer Fetal Muscle Trunk muscle
40 chr1:10697400-10698400 Bivalent Enhancer Fetal Stomach stomach
41 chr1:10697400-10700800 Strong transcription Gastric stomach
42 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
43 chr1:10697600-10698000 Enhancers Fetal Lung lung
44 chr1:10697600-10698000 Enhancers Ovary ovary
45 chr1:10697600-10698200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr1:10697600-10698200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:10697600-10698200 Bivalent Enhancer Fetal Thymus thymus
48 chr1:10697600-10698200 Weak transcription Rectal Smooth Muscle rectum
49 chr1:10697600-10698400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr1:10697600-10698400 Enhancers Primary T helper naive cells from peripheral blood blood

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