Variant report

Variant	rs534488791
Chromosome Location	chr1:158629336-158629337
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3491788	chr1:158537183-158725907	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv3491789	chr1:158537242-158725858	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv872481	chr1:158625789-158712510	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
4	esv3394912	chr1:158628678-158630776	Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv9069	chr1:158629105-158629969	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1958503	chr1:158629189-158629906	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3320733	chr1:158629262-158629787	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3521803	chr1:158629286-158629808	Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3521802	chr1:158629292-158629783	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3521801	chr1:158629303-158629738	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3320728	chr1:158629309-158629773	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3320731	chr1:158629309-158629774	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3521800	chr1:158629315-158629751	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3320730	chr1:158629323-158629727	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:158628800-158629800	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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