Variant report

Variant	rs534593131
Chromosome Location	chr6:143378718-143378719
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr6:143378543-143378860	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143376645..143379470-chr6:143487556..143490248,2	K562	blood:

Variant related genes	Relation type
AIG1	TF binding region

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3474292	chr6:143378209-143378932	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
2	esv3474293	chr6:143378209-143378932	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143372000-143380400	Weak transcription	K562	blood
2	chr6:143373600-143380800	Weak transcription	GM12878-XiMat	blood
3	chr6:143374800-143380800	Weak transcription	Primary T cells from cord blood	blood
4	chr6:143375200-143380000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr6:143375200-143381200	Weak transcription	Aorta	Aorta
6	chr6:143375600-143379600	Weak transcription	Fetal Intestine Small	intestine
7	chr6:143376000-143380600	Weak transcription	Adipose Nuclei	Adipose
8	chr6:143376200-143380800	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr6:143376400-143380200	Weak transcription	Fetal Intestine Large	intestine
10	chr6:143376600-143380000	Weak transcription	Liver	Liver
11	chr6:143376800-143380200	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr6:143376800-143380600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr6:143377200-143380400	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr6:143377200-143380600	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr6:143377200-143380800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr6:143377200-143380800	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr6:143377200-143380800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr6:143377400-143380000	Weak transcription	HepG2	liver
19	chr6:143377600-143380800	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr6:143377800-143380800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr6:143377800-143380800	Weak transcription	Fetal Lung	lung
22	chr6:143378200-143380800	Weak transcription	Stomach Mucosa	stomach
23	chr6:143378400-143380400	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr6:143378600-143380400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr6:143378600-143380800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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