The 2.0 version of rSNPBase

Variant report

Variant rs534653889
Chromosome Location chr5:94895196-94895197
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:94891400-94900200 Weak transcription Gastric stomach
2 chr5:94891800-94900200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:94891800-94902800 Weak transcription Fetal Muscle Trunk muscle
4 chr5:94892000-94906200 Weak transcription Brain Hippocampus Middle brain
5 chr5:94892200-94900200 Weak transcription Fetal Brain Female brain
6 chr5:94892200-94902000 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr5:94892200-94902400 Weak transcription Adipose Nuclei Adipose
8 chr5:94892200-94903000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr5:94892200-94904400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr5:94892200-94904400 Weak transcription Aorta Aorta
11 chr5:94892200-94906000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr5:94892200-94906800 Weak transcription Fetal Kidney kidney
13 chr5:94892200-94907200 Weak transcription Rectal Smooth Muscle rectum
14 chr5:94892200-94907400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:94892200-94934400 Weak transcription Fetal Stomach stomach
16 chr5:94892200-94936600 Weak transcription Fetal Lung lung
17 chr5:94892400-94897000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr5:94892400-94900200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr5:94892400-94900400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr5:94892400-94901400 Weak transcription Primary T cells from cord blood blood
21 chr5:94892400-94902000 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr5:94892400-94902000 Weak transcription Liver Liver
23 chr5:94892400-94902200 Weak transcription Primary T cells fromperipheralblood blood
24 chr5:94892400-94902400 Weak transcription Primary hematopoietic stem cells blood
25 chr5:94892400-94902400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr5:94892400-94902400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr5:94892400-94902600 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr5:94892400-94902600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr5:94892400-94902600 Weak transcription Primary B cells from cord blood blood
30 chr5:94892400-94902600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr5:94892400-94902800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr5:94892400-94902800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:94892400-94902800 Weak transcription Left Ventricle heart
34 chr5:94892400-94902800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr5:94892400-94902800 Weak transcription GM12878-XiMat blood
36 chr5:94892400-94903000 Weak transcription Primary B cells from peripheral blood blood
37 chr5:94892400-94903000 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr5:94892400-94903000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:94892400-94903400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr5:94892400-94903400 Weak transcription Fetal Intestine Large intestine
41 chr5:94892400-94904200 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr5:94892400-94904400 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr5:94892400-94904400 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr5:94892400-94905600 Weak transcription H9 Cell Line embryonic stem cell
45 chr5:94892400-94905800 Weak transcription Brain Cingulate Gyrus brain
46 chr5:94892400-94906000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr5:94892400-94906600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr5:94892400-94907600 Weak transcription Colon Smooth Muscle Colon
49 chr5:94892400-94908800 Weak transcription HepG2 liver
50 chr5:94892400-94910200 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015