Variant report

Variant rs534722311
Chromosome Location chr1:223886393-223886394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223881800-223887000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:223883600-223887800 Weak transcription Fetal Intestine Small intestine
3 chr1:223883800-223887600 Weak transcription Fetal Intestine Large intestine
4 chr1:223884000-223888400 Weak transcription Right Atrium heart
5 chr1:223884200-223887600 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:223884200-223888000 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:223884400-223886400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:223884400-223887400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:223884400-223888400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:223884400-223888800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:223884400-223888800 Weak transcription Pancreas Pancrea
12 chr1:223884600-223886800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:223885600-223886400 Enhancers Brain Cingulate Gyrus brain
14 chr1:223885600-223886400 Enhancers Brain Substantia Nigra brain
15 chr1:223885600-223886400 Enhancers HUVEC blood vessel
16 chr1:223885600-223886600 Enhancers Primary T cells fromperipheralblood blood
17 chr1:223885600-223886600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:223885600-223887400 Enhancers A549 lung
19 chr1:223885600-223888400 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr1:223885800-223886400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:223885800-223886400 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr1:223885800-223886400 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr1:223885800-223886400 Enhancers Primary T helper cells PMA-I stimulated --
24 chr1:223885800-223886400 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr1:223885800-223886400 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr1:223885800-223886400 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr1:223885800-223886400 Enhancers Adipose Nuclei Adipose
28 chr1:223885800-223886400 Flanking Active TSS Brain Hippocampus Middle brain
29 chr1:223885800-223886400 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr1:223885800-223886400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr1:223885800-223886400 Enhancers GM12878-XiMat blood
32 chr1:223885800-223886400 Enhancers HSMM muscle
33 chr1:223885800-223886600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:223885800-223886600 Enhancers Muscle Satellite Cultured Cells --
35 chr1:223885800-223886600 Enhancers K562 blood
36 chr1:223885800-223886600 Enhancers Osteobl bone
37 chr1:223885800-223887400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:223885800-223887800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:223885800-223888600 Enhancers NHDF-Ad bronchial
40 chr1:223886000-223886400 Enhancers Primary monocytes fromperipheralblood blood
41 chr1:223886000-223886400 Enhancers Primary B cells from peripheral blood blood
42 chr1:223886000-223886400 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr1:223886000-223886400 Enhancers Liver Liver
44 chr1:223886000-223886400 Flanking Active TSS Brain Angular Gyrus brain
45 chr1:223886000-223886400 Enhancers Duodenum Mucosa Duodenum
46 chr1:223886000-223886400 Enhancers Fetal Brain Male brain
47 chr1:223886000-223886400 Active TSS Pancreatic Islets Pancreatic Islet
48 chr1:223886000-223886400 Enhancers Rectal Mucosa Donor 31 rectum
49 chr1:223886000-223887800 Enhancers NHEK skin
50 chr1:223886000-223888400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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