Variant report

Variant	rs534750832
Chromosome Location	chr6:81234299-81234300
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531333	chr6:81042427-81836484	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv1019670	chr6:81086504-81569984	ZNF genes & repeats Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	nsv915714	chr6:81134888-81366749	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv886311	chr6:81166178-81239971	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv886312	chr6:81166178-81309481	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv886313	chr6:81177227-81239971	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv463908	chr6:81232993-81287675	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv604054	chr6:81232993-81287675	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81230400-81237800	Weak transcription	Pancreas	Pancrea
2	chr6:81232400-81235800	Enhancers	Fetal Brain Male	brain
3	chr6:81232800-81237000	Weak transcription	Fetal Lung	lung
4	chr6:81233400-81237400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:81233600-81249600	Weak transcription	HSMM	muscle
6	chr6:81233800-81234400	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr6:81233800-81235600	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr6:81233800-81237800	Weak transcription	NHDF-Ad	bronchial
9	chr6:81234000-81234600	Enhancers	HUVEC	blood vessel
10	chr6:81234000-81237000	Weak transcription	Hela-S3	cervix
11	chr6:81234000-81237400	Weak transcription	Fetal Heart	heart
12	chr6:81234000-81237600	Weak transcription	Small Intestine	intestine
13	chr6:81234000-81238000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr6:81234200-81236400	Weak transcription	HepG2	liver
15	chr6:81234200-81237200	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr6:81234200-81237600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr6:81234200-81237800	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr6:81234200-81239200	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr6:81234200-81245000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:81234200-81245200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr6:81234200-81249600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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