Variant report

Variant	rs534921981
Chromosome Location	chr7:26711848-26711849
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:26710914..26713828-chr7:26716140..26720303,3	K562	blood:
2	chr6:100785464..100787327-chr7:26711243..26713423,2	MCF-7	breast:
3	chr1:60507629..60508330-chr7:26711560..26712546,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029596	chr7:26302739-26737913	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv538804	chr7:26302739-26737913	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
4	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
5	nsv830929	chr7:26587888-26749735	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
6	nsv1020378	chr7:26679880-26733872	Bivalent Enhancer Enhancers Strong transcription Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
7	nsv5672	chr7:26711462-26757891	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26678800-26715400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr7:26704800-26712800	Weak transcription	Primary B cells from cord blood	blood
3	chr7:26705000-26714600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr7:26705000-26714600	Weak transcription	NHLF	lung
5	chr7:26705000-26716000	Weak transcription	Primary B cells from peripheral blood	blood
6	chr7:26705000-26759600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr7:26707200-26721800	Weak transcription	Fetal Lung	lung
8	chr7:26707400-26714600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:26707400-26715600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr7:26707600-26714400	Weak transcription	NHEK	skin
11	chr7:26707600-26714800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr7:26707600-26719000	Weak transcription	Fetal Kidney	kidney
13	chr7:26707800-26716400	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr7:26708600-26714600	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr7:26708800-26725600	Weak transcription	Primary neutrophils fromperipheralblood	blood
16	chr7:26710200-26713600	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr7:26710400-26712200	Weak transcription	Primary hematopoietic stem cells	blood
18	chr7:26710600-26713000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr7:26711600-26712400	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr7:26711800-26714400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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