Variant report

Variant	rs534961179
Chromosome Location	chr14:68419084-68419085
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	esv2439284	chr14:68418785-68420303	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68408600-68420200	Weak transcription	Ovary	ovary
2	chr14:68408600-68430200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:68408600-68435400	Weak transcription	Thymus	Thymus
4	chr14:68409400-68434200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:68409600-68430600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr14:68412000-68421600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr14:68412000-68423800	Weak transcription	Stomach Mucosa	stomach
8	chr14:68412000-68431000	Weak transcription	Small Intestine	intestine
9	chr14:68417200-68419200	Weak transcription	Aorta	Aorta
10	chr14:68417400-68428200	Weak transcription	Primary hematopoietic stem cells	blood
11	chr14:68417800-68419200	Enhancers	Rectal Mucosa Donor 31	rectum
12	chr14:68417800-68419400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr14:68418000-68419600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr14:68418400-68420200	Enhancers	Fetal Lung	lung
15	chr14:68418800-68419600	Enhancers	Colon Smooth Muscle	Colon
16	chr14:68418800-68419800	Weak transcription	Fetal Stomach	stomach
17	chr14:68419000-68420000	Enhancers	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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