Variant report

Variant	rs535008026
Chromosome Location	chr11:26927176-26927177
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044544	chr11:26506962-26967285	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv916187	chr11:26576875-27328603	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv897146	chr11:26913936-27019331	Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv983219	chr11:26926565-26932064	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26913800-26927200	Weak transcription	Esophagus	oesophagus
2	chr11:26924200-26927200	Enhancers	Colon Smooth Muscle	Colon
3	chr11:26925000-26927200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr11:26925000-26927200	Enhancers	Fetal Lung	lung
5	chr11:26925200-26927200	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr11:26925200-26927200	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr11:26925200-26927400	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr11:26925200-26928000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:26925400-26927400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:26925600-26927200	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr11:26925600-26927400	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr11:26926000-26936400	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr11:26926200-26927200	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr11:26926200-26927200	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr11:26926400-26931600	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr11:26926800-26927200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr11:26926800-26927200	Enhancers	Stomach Smooth Muscle	stomach
18	chr11:26926800-26927400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr11:26926800-26927400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr11:26926800-26927400	Enhancers	Muscle Satellite Cultured Cells	--
21	chr11:26926800-26927400	Enhancers	Brain Cingulate Gyrus	brain
22	chr11:26927000-26927400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr11:26927000-26927400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr11:26927000-26927400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr11:26927000-26927400	Enhancers	Fetal Muscle Leg	muscle
26	chr11:26927000-26927400	Enhancers	NHDF-Ad	bronchial
27	chr11:26927000-26927400	Enhancers	NHEK	skin
28	chr11:26927000-26931800	Weak transcription	Rectal Smooth Muscle	rectum

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