The 2.0 version of rSNPBase

Variant report

Variant rs535107523
Chromosome Location chr6:82461100-82461101
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:82455200-82464000 Active TSS Right Ventricle heart
2 chr6:82456400-82464000 Active TSS Right Atrium heart
3 chr6:82458400-82464600 Active TSS Duodenum Smooth Muscle Duodenum
4 chr6:82458600-82461400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr6:82458600-82461600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr6:82458600-82461600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr6:82458600-82461600 Flanking Active TSS Adipose Nuclei Adipose
8 chr6:82458600-82463800 Active TSS Stomach Smooth Muscle stomach
9 chr6:82458800-82461600 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr6:82458800-82463800 Active TSS Brain Anterior Caudate brain
11 chr6:82458800-82463800 Active TSS Colon Smooth Muscle Colon
12 chr6:82459000-82463400 Active TSS Colonic Mucosa Colon
13 chr6:82459000-82464400 Active TSS Stomach Mucosa stomach
14 chr6:82459200-82464600 Active TSS Rectal Mucosa Donor 29 rectum
15 chr6:82459400-82461400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr6:82459400-82461400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr6:82459400-82463800 Active TSS Lung lung
18 chr6:82459600-82461800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:82459600-82463800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:82459600-82464000 Active TSS Rectal Smooth Muscle rectum
21 chr6:82459800-82461200 Active TSS Skeletal Muscle Female skeletal muscle
22 chr6:82459800-82461400 Flanking Active TSS Primary B cells from cord blood blood
23 chr6:82459800-82462800 Bivalent/Poised TSS Thymus Thymus
24 chr6:82459800-82463800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:82459800-82463800 Active TSS Aorta Aorta
26 chr6:82459800-82463800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
27 chr6:82459800-82463800 Active TSS Brain Substantia Nigra brain
28 chr6:82459800-82464000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
29 chr6:82459800-82464200 Active TSS Placenta Amnion Placenta Amnion
30 chr6:82459800-82464200 Active TSS HSMM muscle
31 chr6:82459800-82464200 Active TSS NHLF lung
32 chr6:82460000-82461200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr6:82460000-82461200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
34 chr6:82460000-82461200 Active TSS Fetal Stomach stomach
35 chr6:82460000-82461200 Active TSS HepG2 liver
36 chr6:82460000-82461400 Bivalent/Poised TSS GM12878-XiMat blood
37 chr6:82460000-82462000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
38 chr6:82460000-82463400 Active TSS Muscle Satellite Cultured Cells --
39 chr6:82460000-82463400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
40 chr6:82460000-82463400 Active TSS Placenta Placenta
41 chr6:82460000-82463400 Active TSS Rectal Mucosa Donor 31 rectum
42 chr6:82460000-82463400 Active TSS NH-A brain
43 chr6:82460000-82463600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:82460000-82463600 Active TSS Duodenum Mucosa Duodenum
45 chr6:82460000-82463600 Active TSS Fetal Intestine Small intestine
46 chr6:82460000-82463800 Active TSS Liver Liver
47 chr6:82460000-82463800 Active TSS Gastric stomach
48 chr6:82460000-82463800 Active TSS Ovary ovary
49 chr6:82460000-82463800 Active TSS Monocytes-CD14+_RO01746 blood
50 chr6:82460000-82463800 Active TSS NHDF-Ad bronchial

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Last update: Aug 31, 2015